Most LGBT call her a she, if that clears things up. I respect her decision and I would hate for even a fictional character to feel like I don't respect them(I have OCD and it makes me think in weird ways like that XD). Either way, she still has the mind of a woman! I consider the mind to be much more of a defining feature than body. Also, it's politically correct XD
If you look on Tropes and Idioms wiki, they call her a she. There is another wiki that refers to her as a she, though I forget which one.